Curriculum vitae

Forschungsschwerpunkte
  • Titel der Doktorarbeit: "Accessible software frameworks for reproducible image analysis of host-pathogen interactions"
Wissenschaftlicher Werdegang
seit 2018 Doktorand der Bioinformatik am Hans-Knöll-Institut
2018 M.Sc. in Bioinformatik an der Friedrich-Schiller-Universität Jena
2015 B.Sc. in Bioinformatik an der Friedrich-Schiller-Universität Jena

Publikationen

Gerst R*, Cseresnyés Z*, Figge MT (2022) JIPipe: Visual batch processing for ImageJ. ResSquare [Preprint]
Hoffmann B*, Gerst R*, Cseresnyés Z, Fooc W, Sommerfeld O, Press AT, Bauer M, Figge MT (2022) Spatial quantification of clinical biomarker pharmacokinetics through deep learning-based segmentation and signal-oriented analysis of MSOT data. Photoacoustics 26, 100361.
Richter I, Radosa S, Cseresnyés Z, Ferling I, Büttner H, Niehs SP, Gerst R, Figge MT, Hillmann F, Hertweck C (2022) Toxin-producing endosymbionts shield pathogenic fungus against micropredators. mBio 13(5), e0144022.
Büttner H*, Niehs SP*, Vandelannoote K, Cseresnyés Z, Dose B, Richter I, Gerst R, Figge MT, Stinear TP, Pidot SJ, Hertweck C# (2021) Bacterial endosymbionts protect beneficial soil fungus from nematode attack. Proc Natl Acad Sci U S A 118(37), e2110669118.
Gerst R, Medyukhina A, Figge MT (2020) MISA++: A standardized interface for automated bioimage analysis. SoftwareX 11, 100405.