Rakesh Santhanam

Dr. Rakesh Santhanam

Systembiologie und Bioinformatik


Seelbinder B, Chen J, Brunke S, Vazquez-Uribe R, Santhanam R, Meyer AC, de Oliveira Lino FS, Chan KF, Loos D, Imamovic L, Tsang CC, Lam RP, Sridhar S, Kang K, Hube B, Woo PCY, Sommer MOA, Panagiotou G (2020) Antibiotics create a shift from mutualism to competition in human gut communities with a longer-lasting impact on fungi than bacteria. Microbiome 8(1), 133. Details PubMed Open Access PDF

Santhanam R, Menezes RC, Grabe V, Li D, Baldwin IT, Groten K (2019) A suite of complementary biocontrol traits allows a native consortium of root-associated bacteria to protect their host plant from a fungal sudden-wilt disease. Mol Ecol , Details PubMed

Santhanam R, Oh Y, Kumar R, Weinhold A, Luu VT, Groten K, Baldwin IT (2017) Specificity of root microbiomes in native-grown Nicotiana attenuata and plant responses to UVB increase Deinococcus colonization. Mol Ecol 26(9), 2543-2562. Details PubMed

Aizenberg-Gershtein Y, Izhaki I, Santhanam R, Kumar P, Baldwin IT, Halpern M (2015) Pyridine-type alkaloid composition affects bacterial community composition of floral nectar. Sci Rep 5, 11536. Details PubMed

Groten K, Nawaz A, Nguyen NH, Santhanam R, Baldwin IT (2015) Silencing a key gene of the common symbiosis pathway in Nicotiana attenuata specifically impairs arbuscular mycorrhizal infection without influencing the root-associated microbiome or plant growth. Plant Cell Environ 38(11), 2398-2416. Details PubMed

Santhanam R, Luu VT, Weinhold A, Goldberg J, Oh Y, Baldwin IT (2015) Native root-associated bacteria rescue a plant from a sudden-wilt disease that emerged during continuous cropping. Proc Natl Acad Sci U S A 112(36), E5013-E5020. Details PubMed

Santhanam R, Groten K, Meldau DG, Baldwin IT (2014) Analysis of plant-bacteria interactions in their native habitat: bacterial communities associated with wild tobacco are independent of endogenous jasmonic acid levels and developmental stages. PLoS One 9(4), e94710. Details PubMed

Rateb M, Hallyburton I, Houssen WE, Bull A, Goodfellow M, Santhanam R, Jaspars M, Ebel R (2013) Induction of diverse secondary metabolites in Aspergillus fumigatus by microbial co-culture RSC Advances 34(3), 14444-14450. Details

Santhanam R, Rong X, Huang Y, Andrews BA, Asenjo JA, Goodfellow M (2013) Streptomyces bullii sp. nov., isolated from a hyper-arid Atacama Desert soil. Antonie Van Leeuwenhoek 103(2), 367-373. Details PubMed

Santhanam R, Rong X, Huang Y, Goodfellow M (2013) Streptomyces erringtonii sp. nov. and Streptomyces kaempferi sp. nov., isolated from a hay meadow soil. Antonie Van Leeuwenhoek 103(1), 79-87. Details PubMed

Santhanam R, Okoro CK, Rong X, Huang Y, Bull AT, Andrews BA, Asenjo JA, Weon HY, Goodfellow M (2012) Streptomyces deserti sp. nov., isolated from hyper-arid Atacama Desert soil. Antonie Van Leeuwenhoek 101(3), 575-581. Details PubMed

Santhanam R, Okoro CK, Rong X, Huang Y, Bull AT, Weon HY, Andrews BA, Asenjo JA, Goodfellow M (2012) Streptomyces atacamensis sp. nov., isolated from an extreme hyper-arid soil of the Atacama Desert, Chile. Int J Syst Evol Microbiol 62(Pt 11), 2680-2684. Details PubMed

Santhanam R, Baldwin IT, Groten K (0) In wild tobacco, Nicotiana attenuata, variation among bacterial communities of isogenic plants is mainly shaped by the local soil microbiota independently of the plants' capacity to produce jasmonic acid. Commun Integr Biol 8(2), e1017160. Details PubMed