Applied Systems Biology

Gerst R, Cseresnyés Z, Figge MT^# (2025) Intuitive Abläufe für die automatisierte Bildanalyse. JIPipe als quelloffene Softwarelösung für FAIRe Bildanalyse. Online-Publikation bei Wiley Analytical Science

Graf M^*, Sarkar A^*, Svensson CM, Munser AS, Schröder S, Hengoju S, Rosenbaum MA^#, Figge MT^# (2025) Rapid detection of microbial antibiotic susceptibility via deep learning supported analysis of angle-resolved scattered-light images of picoliter droplet cultivations. Sens Actuators B Chem 424, 136866.

Koceva H, Amiratashani M, Akbarimoghaddam P, Hoffmann B, Zhurgenbayeva G, Gresnigt MS, Marcelino VR, Eggeling C, Figge MT, Amorim MJ, Mosig AS^# (2025) Deciphering respiratory viral infections by harnessing organ-on-chip technology to explore the gut–lung axis. Open Biol 15(3), 240231.

Lossius-Cott C, Annoh A, Bens M, Nietzsche S, Hoffmann B, Figge MT, Rauner M, Hofbauer LC, Müller JP^# (2025) Oncogenic FLT3 internal tandem duplications (ITD) and CD45/PTPRC control osteoclast functions and bone microarchitecture. JBMR Plus 9(3), ziae173.

Praetorius JP^*, Hitzler SUJ^*, Gresnigt MS^#, Figge MT^# (2025) Image-based quantification of Candida albicans filamentation and hyphal length using the open-source visual programming language JIPipe. FEMS Yeast Res [Accepted]

Xiong L, Beyer D, Liu N, Lehmann T, Neugebauer S, Schaeuble S, Sommerfeld O, Ernst P, Svensson CM, Nietzsche S, Scholl S, Bruns T, Gaßler N, Gräler MH, Figge MT, Panagiotou G, Bauer M, Press AT^# (2025) Targeting protein kinase C-α prolongs survival and restores liver function in sepsis: evidence from preclinical models. Pharmacol Res 212, 107581.

Abou-Kandil A^*, Tröger-Görler S^*, Pschibul A^*, Krüger T, Rosin M, Schmidt F, Akbarimoghaddam P, Sarkar A, Cseresnyés Z, Shadkchan Y, Heinekamp T, Gräler MH, Barber AE, Walther G, Figge MT, Brakhage AA, Osherov N^#, Kniemeyer O^# (2024) The proteomic response of Aspergillus fumigatus to Amphotericin B (AmB) reveals the involvement of the RTA-like protein RtaA in AmB resistance. microLife 6, uqae024.

Alonso-Roman R, Mosig AS, Figge MT, Papenfort K, Eggeling C, Schacher FH, Hube B^#, Gresnigt MS (2024) Organ-on-chip models for infectious disease research. Nat Microbiol 9(4), 891-904. (Review)

Chamas A^#, Svensson CM, Maneira C, Sporniak M, Figge MT, Lackner G (2024) Engineering adhesion of the probiotic strain Escherichia coli nissle to the fungal pathogen Candida albicans. ACS Synth Biol 13(12), 4027-4039.