(2022)
JIPipe: Visual batch processing for ImageJ.
ResSquare
[Preprint]
Dr. Zoltán Cseresnyés
Applied Systems Biology · PolyTarget +49 3641 532-1532 zoltan.cseresnyes@leibniz-hki.deCurriculum vitae
Main Research Areas
- Intravital 2-photon microscopy of the immune system
- Software development for automated and advanced image analysis and model-based simulations
- Image-based Systems Biology
Professional Career
| since 2016 | Research associate, imaging and image analysis specialist at the Hans Knoell Institute, Jena |
| 2016-2016 | Microscopy and imaging specialist at the Deutsches Rheuma-Forschungszentrum (DRFZ) and the Beuth Hochschule, Berlin |
| 2012-2016 | Microscopy and imaging specialist in the JIMI (Joint Intravital Microscopy and Imaging) project at the Deutsches Rheuma-Forschungszentrum, Max Delbrück Center (Berlin) and at the Hans Knoell Institute, Jena |
| 2010-2012 | Research associate and Co-manager of the Confocal and 2-Photon Microscopy Core Facility at Max Delbrück Center for Molecular Medicine in Berlin |
| 2007-2010 | Imaging Facility manager in the Department of Zoology at the University of Cambridge (GB) |
| 1994-2007 | Research associate and confocal imaging specialist in the Department of Biochemistry and Molecular Biology at the University of Maryland Baltimore (USA) |
| 1991-1994 | Research associate in the Department of Physiology at the School of Medicine at Debrecen University (HU) |
| 1985-1991 | Research associate in the Department of Solid State Physics at Debrecen University (HU) |
Publications
(2022)
The lipid raft-associated protein stomatin is required for accumulation of dectin-1 in the phagosomal membrane and for full activity of macrophages against Aspergillus fumigatus.
bioRxiv ,
2022.02.25.481948.
(2022)
Invasive aspergillosis-on-chip: A quantitative treatment study of human Aspergillus fumigatus infection.
Biomaterials 283,
121420.
(2022)
Spatial quantification of clinical biomarker pharmacokinetics through deep learning-based segmentation and signal-oriented analysis of MSOT data.
Photoacoustics 26,
100361.
(2022)
Human macrophage polarization determines bacterial persistence of Staphylococcus aureus in a liver-on-chip-based infection model.
Biomaterials 287,
121632.
(2021)
Bacterial endosymbionts protect beneficial soil fungus from nematode attack.
Proc Natl Acad Sci U S A 118(37),
e2110669118.
(2021)
Biocompatible sulfated valproic acid-coupled polysaccharide-based nanocarriers with HDAC inhibitory activity.
J Control Release 329,
717-730.
(2021)
Stealth effect of short polyoxazolines in graft copolymers: Minor changes of backbone end group determine liver cell-type specificity.
ACS Nano 15(7),
12298-12313.
(2021)
Targeted delivery of a phosphoinositide 3-kinase γ inhibitor to restore organ function in sepsis.
EMBO Mol Med 13,
e14436.
(2021)
Expression patterns in reductive iron assimilation and functional consequences during phagocytosis of Lichtheimia corymbifera, an emerging cause of mucormycosis.
J Fungi (Basel) 7(4),
272.
