- signal and data analysis
- analysis of medical and microscopy images using computer vision approaches
- statistical modeling and machine learning
|since 2012||Postdoctoral researcher in the Applied Systems Biology group, Hans Knöll Institute, Jena, Germany.|
|2011-2012||Postdoctoral researcher in the group Computational Neuroscience and Machine Learning at Frankfurt Institute for Advanced Studies (FIAS) in Frankfurt am Main|
|2009-2011||Postdoctoral researcher in the Visual Neuroscience group at the School of Psychology at the University of Nottingham (GB)|
|2009||PhD in Applied Mathematics at the University of Nottingham (GB)|
|2005||M.Sc. in Engineering Physics at the Royal Institute of Technology in Stockholm (SWE)|
(2019) Lack of CD45 in FLT3-ITD mice results in a myeloproliferative phenotype, cortical porosity, and ectopic bone formation. Oncogene [Epub ahead of print]
(2019) Coding of experimental conditions in microfluidic droplet assays using colored beads and machine learning supported image analysis. Small 15(4), e1802384.
(2019) Clinical S. aureus isolates vary in their virulence to promote adaptation to the host. Toxins 11(3), 135.
(2018) Candida albicans-induced epithelial damage mediates translocation through intestinal barriers. mBio 9(3), e00915-18.
(2018) Untangling cell tracks: quantifying cell migration by time lapse image data analysis. Cytometry A 93(3), 357-370.
(2017) Mast cells acquire MHCII from dendritic cells during skin inflammation. J Exp Med 214(12), 3791-3811.
(2017) Automated quantification of early bone alterations and pathological bone turnover in experimental arthritis by in vivo PET/CT imaging. Sci Rep 7, 2217.
(2017) Quantification of arthritic bone degradation by analysis of 3D micro-computed tomography data. Sci Rep 7, 44434.
(2017) Segmentation of clusters by template rotation expectation maximization. Comput Vis Image Underst 152, 64-72.
(2015) Estimation of cortical magnification from positional error in normally sighted and amblyopic subjects. Journal of Vision 15(2), 1-16.
(2015) Automated quantification of the phagocytosis of Aspergillus fumigatus conidia by a novel image analysis algorithm. Frontiers in Microbiology 6(549), *authors contributed equally.
(2015) Automated classification of circulating tumor cells and the impact of inter-observer variability on classifier training and performance. Journal of Immunology Research 2015(Article ID 573165), 9.
(2014) Automated detection of circulating tumor cells with naive Bayesian classifiers. Cytometry A 85(6), 501-511.
(2012) Using evolutionary algorithms for fitting high-dimensional models to neuronal data. Neuroinformatics 10(2), 199-218.
(2009) Mode locking in a spatially extended neuron model: active soma and compartmental tree. Int J Bifurcat Chaos 19(2597),
(2007) Branching dendrites with resonant membrane: a Biol Cybern 97(2), 137-149.