Carl-Magnus Svensson

Dr. Carl-Magnus Svensson

Applied Systems Biology · DropCode

Phone: +49 3641 532-1088 Fax: +49 3641 532-2088 Email: carl-magnus.svensson@leibniz-hki.de

Main Research Areas
  • signal and data analysis
  • analysis of medical and microscopy images using computer vision approaches
  • statistical modeling and machine learning
Curriculum vitae

Professional Career

since 2012 Postdoctoral researcher in the Applied Systems Biology group, Hans Knöll Institute, Jena, Germany.
2011-2012 Postdoctoral researcher in the group Computational Neuroscience and Machine Learning at Frankfurt Institute for Advanced Studies (FIAS) in Frankfurt am Main
2009-2011 Postdoctoral researcher in the Visual Neuroscience group at the School of Psychology at the University of Nottingham (GB)
2009 PhD in Applied Mathematics at the University of Nottingham (GB)
2005 M.Sc. in Engineering Physics at the Royal Institute of Technology in Stockholm (SWE)
Publications

Allert S*, Förster TM*, Svensson CM, Richardson JP, Pawlik T, Hebecker B, Rudolphi S, Juraschitz M, Schaller M, Blagojevic M, Morschhäuser J, Figge MT, Jacobsen ID, Naglik JR, Kasper L, Mogavero S, Hube B; *authors contributed equally (2018) Candida albicans-induced epithelial damage mediates translocation through intestinal barriers. mBio [Accepted] Details

Svensson C-M, Medyukhina A, Belyaev I, Al-Zaben N, Figge MT (2018) Untangling cell tracks: quantifying cell migration by time lapse image data analysis. Cytometry A 93(3), 357-370. Details PubMed Open Access PDF

Dudeck J*, Medyukhina A*, Froebel J, Svensson C-M, Kotrba J, Gerlach M, Gradtke A-C, Schröder B, Speier S, Figge MT**, Dudeck A**; *authors contributed equally; **corresponding authors, authors contributed equally (2017) Mast cells acquire MHCII from dendritic cells during skin inflammation. The Journal of Experimental Medicine 214(12), 3791-3811. Details PubMed

Hoffmann B*, Svensson C-M*, Straßburger M, Gebser B, Irmler IM, Kamradt T, Saluz HP, Figge MT, *authors contributed equally (2017) Automated quantification of early bone alterations and pathological bone turnover in experimental arthritis by in vivo PET/CT imaging. Sci Rep 7, 2217. Details PubMed Open Access PDF

Svensson C-M*, Hoffmann B*, Irmler I, Straßburger M, Figge MT**, Saluz HP**; *authors contributed equally; **corresponding authors, authors contributed equally (2017) Quantification of arthritic bone degradation by analysis of 3D micro-computed tomography data. Sci Rep 7, 44434. Details PubMed Open Access PDF Supplement

Svensson C-M, Bondoc K G, Pohnert G, Figge MT (2017) Segmentation of clusters by template rotation expectation maximization. Computer Vision and Image Understanding 152, 64-72. Details

Hussain Z, Svensson C-M, Besle J, Webb BS, Barrett BT, McGraw PV (2015) Estimation of cortical magnification from positional error in normally sighted and amblyopic subjects. Journal of Vision 15(2), 1-16. Details PubMed Open Access

Kraibooj K*, Schoeler H*, Svensson C-M, Brakhage AA, Figge MT (2015) Automated quantification of the phagocytosis of Aspergillus fumigatus conidia by a novel image analysis algorithm. Frontiers in Microbiology 6(549), *authors contributed equally. Details PubMed Open Access

Svensson C-M, Hübler R, Figge MT (2015) Automated classification of circulating tumor cells and the impact of inter-observer variability on classifier training and performance. Journal of Immunology Research 2015(Article ID 573165), 9. Details PubMed Open Access

Svensson C-M, Krusekopf S, Lücke J, Figge MT (2014) Automated detection of circulating tumor cells with naive Bayesian classifiers. Cytometry A 85(6), 501-511. Details PubMed

Svensson C-M, Coombes S, Peirce JW (2012) Using evolutionary algorithms for fitting high-dimensional models to neuronal data. Neuroinformatics 10(2), 199-218. Details PubMed

Svensson C-M, Coombes S (2009) Mode locking in a spatially extended neuron model: active soma and compartmental tree. Int J Bifurcat Chaos 19(2597), Details Open Access

Coombes S, Timofeeva Y, Svensson C-M, Lord GJ, Josić K, Cox SJ, Colbert CM (2007) Branching dendrites with resonant membrane: a Biol Cybern 97(2), 137-149. Details PubMed