- signal and data analysis
- analysis of medical and microscopy images using computer vision approaches
- statistical modeling and machine learning
|since 2012||Postdoctoral researcher in the Applied Systems Biology group, Hans Knöll Institute, Jena, Germany.|
|2011-2012||Postdoctoral researcher in the group Computational Neuroscience and Machine Learning at Frankfurt Institute for Advanced Studies (FIAS) in Frankfurt am Main|
|2009-2011||Postdoctoral researcher in the Visual Neuroscience group at the School of Psychology at the University of Nottingham (GB)|
|2009||PhD in Applied Mathematics at the University of Nottingham (GB)|
|2005||M.Sc. in Engineering Physics at the Royal Institute of Technology in Stockholm (SWE)|
(2018) Candida albicans-induced epithelial damage mediates translocation through intestinal barriers. mBio [Accepted]
(2018) Untangling cell tracks: quantifying cell migration by time lapse image data analysis. Cytometry A 93(3), 357-370.
(2017) Mast cells acquire MHCII from dendritic cells during skin inflammation. The Journal of Experimental Medicine 214(12), 3791-3811.
(2017) Automated quantification of early bone alterations and pathological bone turnover in experimental arthritis by in vivo PET/CT imaging. Sci Rep 7, 2217.
(2017) Quantification of arthritic bone degradation by analysis of 3D micro-computed tomography data. Sci Rep 7, 44434.
(2017) Segmentation of clusters by template rotation expectation maximization. Computer Vision and Image Understanding 152, 64-72.
(2015) Estimation of cortical magnification from positional error in normally sighted and amblyopic subjects. Journal of Vision 15(2), 1-16.
(2015) Automated quantification of the phagocytosis of Aspergillus fumigatus conidia by a novel image analysis algorithm. Frontiers in Microbiology 6(549), *authors contributed equally.
(2015) Automated classification of circulating tumor cells and the impact of inter-observer variability on classifier training and performance. Journal of Immunology Research 2015(Article ID 573165), 9.
(2014) Automated detection of circulating tumor cells with naive Bayesian classifiers. Cytometry A 85(6), 501-511.
(2012) Using evolutionary algorithms for fitting high-dimensional models to neuronal data. Neuroinformatics 10(2), 199-218.
(2009) Mode locking in a spatially extended neuron model: active soma and compartmental tree. Int J Bifurcat Chaos 19(2597),
(2007) Branching dendrites with resonant membrane: a Biol Cybern 97(2), 137-149.