(2021)
Enhanced segmentation of label-free cells for automated migration and interaction tracking.
Cytometry A ,
1-12.
Curriculum vitae
Main Research Areas
- Host-pathogen interaction on human pathogenic fungi
- Automated processing of microscopic images
- Spatiotemporal computer simulations of agent-based infection models
Professional Career
| since 2021 | Professor (W3) for Applied Systems Biology, Friedrich Schiller University Jena |
| since 2011 | Head of Research Group Applied Systems Biology, Leibniz-HKI |
| 2011-2021 | Professor (W2) for Applied Systems Biology, Friedrich Schiller University Jena |
| 2005-2010 | Junior Fellow in Theoretical Immunology at the Frankfurt Institute for Advanced Studies (FIAS) of the Goethe University Frankfurt |
| 2001-2005 | Research assistant in Computer Physics at the University Groningen (NL) |
| 2000 | Dr. rer. nat. in Physics at the University Groningen (NL) |
| 1995 | Diploma in Physics at the University Dortmund |
Awards · Appointments · Scientific Activities
Awards
| 2011 - 2017 | Adjunct Fellow at Frankfurt Institute for Advanced Studies (FIAS) |
Scientific Activities and Functions
| since 2021 | Deputy Coordinator of the Jena School for Microbial Communication |
| since 2019 | Coordinator of Research Area C – Data Synopsis in the Excellence Cluster “Balance of the Microverse” |
| Member of the Management Board of the Microverse Imaging Center in the Excellence Cluster “Balance of the Microverse” | |
| since 2019 | Speaker of Leibniz ScienceCampus “InfectoOptics” |
| since 2019 | Editor: Scientific Reports |
| since 2017 | Ombudsperson at the Leibniz Institute for Natural Product Research and Infection Biology |
| since 2017 | PI and member of the DFG-Collaborative Research Center 1278 PolyTarget |
| since 2017 | Editor: Cytometry A |
| since 2015 | Member: Jena Center for Soft Matter |
| since 2015 | Member: Michael Stifel Center for Data-Driven and Simulation Science |
| since 2014 | PI and member of the DFG-Collaborative Research Center 124 FungiNet |
| since 2014 | Editor: Computational and Mathematical Models in Medicine |
| since 2012 | Organizer: Biennial international symposium on “Image-based Systems Biology” (IbSB) |
| since 2011 | Organizer: Biennial international symposium on “Systems Biology of Microbial Infection” (SBMI) |
| since 2011 | Member: International Leibniz Research School for Microbial and Biomolecular Interactions |
| since 2011 | Member: Jena School for Microbial Communication |
Publications
(2021)
Bacterial endosymbionts protect beneficial soil fungus from nematode attack.
Proc Natl Acad Sci U S A 118(37),
e2110669118.
(2021)
Ground truthing from multi-rater labeling with three-way decision and possibility theory.
Inf Sci 545,
771-790.
(2021)
Mit Tropfenmikrofluidik zu Hochgeschwindigkeits-Biotechnologie.
BIOspektrum 27(3),
260-262.
(Review)
(2021)
Comparative assessment of immune evasion mechanisms in human whole-blood infection assays by a systems biology approach.
PLOS One 16(4),
e0249372.
(2021)
Ex vivo immune profiling in patient blood enables quantification of innate immune effector functions.
Sci Rep 11(1),
12039.
(2021)
Stealth effect of short polyoxazolines in graft copolymers: Minor changes of backbone end group determine liver cell-type specificity.
ACS Nano 15(7),
12298-12313.
(2021)
Targeted delivery of a phosphoinositide 3-kinase γ inhibitor to restore organ function in sepsis.
EMBO Mol Med 13,
e14436.
(2021)
Targeting complement C5a receptor 1 for the treatment of immunosuppression in sepsis.
Mol Ther 29(1),
338-346.
(2021)
Expression patterns in reductive iron assimilation and functional consequences during phagocytosis of Lichtheimia corymbifera, an emerging cause of mucormycosis.
J Fungi (Basel) 7(4),
272.
