Rainer König



Krupp M, Maass T, Marquardt JU, Staib F, Bauer T, König R, Biesterfeld S, Galle PR, Tresch A, Teufel A (2011) The functional cancer map: a systems-level synopsis of genetic deregulation in cancer. BMC Med Genomics 4, 53-53.
Fischer M, Bauer T, Oberthür A, Hero B, Theissen J, Ehrich M, Spitz R, Eils R, Westermann F, Brors B, König R, Berthold F (2010) Integrated genomic profiling identifies two distinct molecular subtypes with divergent outcome in neuroblastoma with loss of chromosome 11q. Oncogene 29(6), 865-875.
Lewis NE, Hixson KK, Conrad TM, Lerman JA, Charusanti P, Polpitiya AD, Adkins JN, Schramm G, Purvine SO, Lopez-Ferrer D, Weitz KK, Eils R, König R, Smith RD, Palsson BØ (2010) Omic data from evolved E. coli are consistent with computed optimal growth from genome-scale models. Mol Syst Biol 6, 390.
Lewis NE, Schramm G, Bordbar A, Schellenberger J, Andersen MP, Cheng JK, Patel N, Yee A, Lewis RA, Eils R, König R, Palsson BØ (2010) Large-scale in silico modeling of metabolic interactions between cell types in the human brain. Nat Biotechnol 28(12), 1279-1285.
Plaimas K, Eils R, König R (2010) Identifying essential genes in bacterial metabolic networks with machine learning methods. BMC Syst Biol 4, 56.
Riehl A, Bauer T, Brors B, Busch H, Mark R, Németh J, Gebhardt C, Bierhaus A, Nawroth P, Eils R, König R, Angel P, Hess J (2010) Identification of the Rage-dependent gene regulatory network in a mouse model of skin inflammation. BMC Genomics 11, 537.
Schramm G, Kannabiran N, König R (2010) Regulation patterns in signaling networks of cancer. BMC Syst Biol 4, 162.
Schramm G, Surmann EM, Wiesberg S, Oswald M, Reinelt G, Eils R, König R (2010) Analyzing the regulation of metabolic pathways in human breast cancer. BMC Med Genomics 3, 39.
Schramm G, Wiesberg S, Diessl N, Kranz AL, Sagulenko V, Oswald M, Reinelt G, Westermann F, Eils R, König R (2010) PathWave: discovering patterns of differentially regulated enzymes in metabolic pathways. Bioinformatics 26(9), 1225-1231.
Suratanee A, Rebhan I, Matula P, Kumar A, Kaderali L, Rohr K, Bartenschlager R, Eils R, König R (2010) Detecting host factors involved in virus infection by observing the clustering of infected cells in siRNA screening images. Bioinformatics 26(18), i653-i658.