Zeinab Mokhtari Asl
Main Research Areas
  • topic of the PhD thesis: "Quantitative analysis of migrating and interacting immune cells from image data"
  • quantification and classification of cell tracks
  • analysis of cell colocalization in murine bone marrow
  • simulation of cell migration with shape deformation
Curriculum vitae

Professional Career

since 2011 PhD student in bioinformatics at the Friedrich-Schiller-University Jena
2009 M.Sc. in physics at Alzahra University (IR)
2007 B.Sc. in physics at Zanjan University (IR)
Publications

Brandes S, Mokhtari Z, Essig F, Hünniger K, Kurzai O, Figge MT (2015) Automated segmentation and tracking of non-rigid objects in time-lapse microscopy videos of polymorphonuclear neutrophils. Medical Image Analysis 20(1), 34-51. Details PubMed

Duggan S, Essig F, Hünniger K, Mokhtari Z, Bauer L, Lehnert T, Brandes S, Häder A, Jacobsen ID, Martin R, Figge MT, Kurzai O (2015) Neutrophil activation by Candida glabrata but not Candida albicans promotes fungal uptake by monocytes. Cell Microbiol 17(9), 1259-1276. Details PubMed

Medyukhina A, Timme S, Mokhtari Z, Figge MT (2015) Image-based Systems Biology of Infection. Cytometry A 87(6), 462-470. Details PubMed

Mokhtari Z*, Mech F*, Zehentmeier S, Hauser AE, Figge MT (2015) Quantitative image analysis of cell colocalization in murine bone marrow. Cytometry A 87(6), 503-512, *authors contributed equally. Details PubMed

Mokhtari Z, Mech F, Zitzmann C, Hasenberg M, Gunzer M, Figge MT (2013) Automated characterization and parameter-free classification of cell tracks based on local migration behavior. PLOS ONE 8(12), e80808. Details PubMed Open Access