- topic of the PhD thesis: "Quantitative analysis of migrating and interacting immune cells from image data"
- quantification and classification of cell tracks
- analysis of cell colocalization in murine bone marrow
- simulation of cell migration with shape deformation
|since 2011||PhD student in bioinformatics at the Friedrich-Schiller-University Jena|
|2009||M.Sc. in physics at Alzahra University (IR)|
|2007||B.Sc. in physics at Zanjan University (IR)|
(2015) Automated segmentation and tracking of non-rigid objects in time-lapse microscopy videos of polymorphonuclear neutrophils. Medical Image Analysis 20(1), 34-51.
(2015) Neutrophil activation by Candida glabrata but not Candida albicans promotes fungal uptake by monocytes. Cell Microbiol 17(9), 1259-1276.
(2015) Image-based Systems Biology of Infection. Cytometry A 87(6), 462-470.
(2015) Quantitative image analysis of cell colocalization in murine bone marrow. Cytometry A 87(6), 503-512, *authors contributed equally.
(2013) Automated characterization and parameter-free classification of cell tracks based on local migration behavior. PLOS ONE 8(12), e80808.