Dissanayake TK, Schäuble S, Mirhakkak MH, Wu WL, Ng C-K, Yip C-Y, García-López A, Wolf T, Yeung M-L, Chan K-H, Yuen K-Y, Panagiotou G, To K-W (2020) Comparative transcriptomic analysis of rhinovirus and influenza virus infection. Front Microbiol 11(1580), 1-13. Details PubMed Open Access PDF

Kämmer P, McNamara S*, Wolf T, Conrad T, Allert S, Gerwien F, Hünniger K, Kurzai O, Guthke R, Hube B, Linde J, Brunke S (2020) Survival strategies of pathogenic Candida species in human blood show independent and specific adaptations. mBio 11(5), e02435-20. Details PubMed

Seelbinder B, Wallstabe J, Marischen L, Weiss E, Wurster S, Page L, Loffler C, Bussemer L, Schmitt AN, Wolf T, Linde J, Cicin-Sain L, Becker J, Kalinke U, Vogel J, Panagiotou G, Einsele H, Westermann AJ, Schauble S, Loefller J (2020) Triple RNA-seq reveals synergy in a human virus-fungus co-infection model. Cell Reports 33(7), 108389. Details PubMed Open Access PDF

Radosa S, Sprague JL, Tóth R, Wolf T, Sprenger M, Brunke S, Panagiotou G, Linde J, Gácser A, Hillmann F (2019) Phagocytic predation by the fungivorous amoeba Protostelium aurantium targets metal ion and redox homeostasis. bioRxiv 690503, preprint. Details Open Access PDF

Wolf T, Kämmer P, Brunke S, Linde J (2018) Two's company: studying interspecies relationships with dual RNA-seq. Curr Opin Microbiol 42, 7-12. (Review) Details PubMed Open Access PDF

Blin K, Wolf T, Chevrette M, Lu X, Schwalen C, Kautsar S, Suarez Duran, H, de los Santos E, Kim HU, Nave M, Dickschat J, Mitchell D, Shelest E, Breitling R, Takano E, Lee SY, Weber T, Medema M (2017) antiSMASH 4.0 — Improvements in Chemistry Prediction and Gene Cluster Boundary Identification. Nucleic Acids Res 45(W1), W36-W41. Details PubMed Open Access

Penselin D, Münsterkötter M, Kirsten S, Felder M, Taudien S, Platzer M, Asheldford K, Paszkiewicz KH, Harrison R, Hughes DJ, Wolf T, Shelest E, Graap J, Hoffmann J, Wenzel C, Wöltje N, King KM, Fitt BDL, Güldener U, Avrova A, Knogge W (2016) Comparative genomics to explore phylogenetic relationship, cryptic sexual potential and host specificity of Rhynchosporium species on grasses BMC Genomics 17(1), 953. Details Open Access

Rischer M, Klassen J, Wolf T, Guo H, Shelest E, Clardy J, Beemelmanns C (2016) Draft Genome Sequence of Shewanella sp. P1-14-1, a Bacterial Inducer of Settlement and Morphogenesis in Larvae of the Marine Hydroid Hydractinia Echinata Genome Announc 4(1), e00003-16. Details PubMed

Voigt K, Wolf T, Ochsenreiter K, Nagy G, Kaerger K, Shelest E, Papp T (2016) 15 Genetic and metabolic aspects of primary and secondary metabolism of the Zygomycetes In: Hoffmeister D. (eds) Biochemistry and Molecular Biology (ed.) The Mycota Vol. III: 3rd edition. III, pp. 361-385. Springer Verlag, Berlin, Heidelberg, New York. (Review) Details Open Access PDF

Klassen JL, Rischer M, Wolf T, Guo H, Shelest E, Clardy J, Beemelmanns C (2015) Genome Sequences of Three Pseudoalteromonas Strains P1-8, P1-11 and P1-30 Isolated from the Marine Hydroid Hydractinia echinata Genome Announc. 3(6), e01380-15. Details PubMed

Klassen JL, Wolf T, Rischer M, Guo H, Shelest E, Clardy J, Beemelmanns C (2015) Draft Genome Sequences of Six Pseudoalteromonas sp. Strains P1-7a, P1-9, P1-13-1a, P1-16-1b, P1-25 and P1-26, which Induce Larval Settlement and Metamorphosis in Hydractinia echinata Genome Announc. 3(6), e01477-15. Details PubMed

Wolf T, Shelest V, Nath N, Shelest E (2015) CASSIS and SMIPS: Promoter-based prediction of secondary metabolite gene clusters in eukaryotic genomes Bioinformatics 32(8), 1138-1143. Details PubMed Open Access

Wartenberg A, Linde J, Martin R, Schreiner M, Horn F, Jacobsen ID, Jenull S, Wolf T, Kuchler K, Guthke R, Kurzai O, Forche A, d'Enfert C, Brunke S, Hube B (2014) Microevolution of Candida albicans in macrophages restores filamentation in a nonfilamentous mutant. PLOS Genet 10(12), e1004824. Details PubMed Open Access

Wolf T, Shelest V, Shelest E (2013) Motif-based method for genome-wide prediction of eukaryotic gene clusters In: A. Petrosino, L. Maddalena, P. Pala (eds.) Lecture Notes in Computer Science (LNCS) 2nd International Workshop on Pattern Recognition in Proteomics, Structural Biology and Bioinformatics, Naples, Italien, 09/09/2013-09/10/2013, 8158, pp. 389-398.Springer-Verlag, Berlin, Heidelberg. Details