Microbiome Dynamics

Zoran T, Seelbinder B, White PL, Price JS, Kraus S, Kurzai O, Linde J, Häder A, Loeffler C, Grigoleit GU, Einsele H, Panagiotou G, Loeffler J, Schäuble S (2022) Molecular profiling reveals characteristic and decisive signatures in patients after allogeneic stem cell transplantation suffering from invasive pulmonary aspergillosis. J Fungi (Basel) 8(2), 171.

Barber AE^*, Sae-Ong T^*, Kang K, Seelbinder S, Li J, Walther G, Panagiotou G^# & Kurzai O^# (2021) Aspergillus fumigatus pan-genome analysis identifies genetic variants associated with human infection. Nat Microbiol 6, 1526-1536.

Boysen JM, Saeed N, Wolf T, Panagiotou G, Hillmann F (2021) The peroxiredoxin asp f3 acts as redox sensor in Aspergillus fumigatus. Genes 12(5), 668.

Kang K, Imamovic L, Misiakou M, Sørensen MB, Heshiki Y, Ni Y, Zheng T, Li J, Ellabaan MMH, Colomer-Lluch M, Rode AA, Bytzer P, Panagiotou G^#, Sommer MOA (corresponding author^#) (2021) Expansion and persistence of antibiotic-specific resistance genes following antibiotic treatment. Gut Microbes 13(1), 1-19.

Lauruschkat CD, Etter S, Schnack E, Ebel F, Schäuble S, Page L, Rümens D, Dragan M, Schlegel N, Panagiotou G, Kniemeyer O, Brakhage AA, Einsele H, Wurster S, Loeffler J (2021) Chronic occupational mold exposure drives expansion of Aspergillus-reactive type 1 and type 2 T-helper cell responses. J Fungi 7(9), 698.

Li Z, Geffers R, Jain G, Klawonn F, Kökpinar Ö, Nimtz M, Schmidt‐Heck W, Rinas U (2021) Transcriptional network analysis identifies key elements governing the recombinant protein production provoked reprogramming of carbon and energy metabolism in Escherichia coli BL21 (DE3) Engineering Reports , e12393.

Loos D^*, Zhang L, Beemelmanns C, Kurzai O, Panagiotou G^# (2021) DAnIEL: A user-friendly web server for fungal ITS amplicon sequencing data. Front Microbiol 12, 720513.

Marfil-Sanchez A^*, Seelbinder B ^*, Ni Y, Varga J, Berta J, Hollosi V, Dome B, Megyesfalvi Z, Dulka E, Galffy G, Weiss GJ, Panagiotou G^#, Zoltan Lohinai Z^# (2021) Gut microbiome functionality might be associated with exercise tolerance and recurrence of resected early-stage lung cancer patients. PLOS One 16(11), e0259898.

Marfil-Sánchez A^*, Zhang L^*, Alonso-Pernas P, Mirhakkak M, Mueller M, Seelbinder B, Ni Y, Santhanam R, Busch A, Beemelmanns C, Ermolaeva M, Bauer M^#, Panagiotou G^# (2021) An integrative understanding of the large metabolic shifts induced by antibiotics in critical illness. Gut Microbes 13(1), 1993598.

Mazumdar T, Teh BS, Murali A, Schmidt-Heck W, Schlenker Y, Vogel H, Boland W (2021) Transcriptomics reveal the survival strategies of Enterococcus mundtii in the gut of Spodoptera littoralis. J Chem Ecol 47(2), 227-241.