Publications

Wolf T, Shelest V, Shelest E (2013) Motif-based method for genome-wide prediction of eukaryotic gene clusters In: A. Petrosino, L. Maddalena, P. Pala (eds.) Lecture Notes in Computer Science (LNCS) 2nd International Workshop on Pattern Recognition in Proteomics, Structural Biology and Bioinformatics, Naples, Italien, 09/09/2013-09/10/2013, 8158, pp. 389-398.Springer-Verlag, Berlin, Heidelberg.
Altwasser R, Linde J, Buyko E, Hahn U, Guthke R (2012) Genome-wide scale-free network inference for Candida albicans. Front Microbiol 3, 51.
Baumgart M, Groth M, Priebe S, Appelt J, Guthke R, Platzer M, Cellerino A (2012) Age-dependent regulation of tumor-related microRNAs in the brain of the annual fish Nothobranchius furzeri. Mech Ageing Dev 133(5), 226-233.
Druzhinina IS, Shelest E, Kubicek CP (2012) Novel traits of Trichoderma predicted through the analysis of its secretome. FEMS Microbiol Lett 337(1), 1-9.
Erdmann S, Freihorst D, Raudaskoski M, Schmidt-Heck W, Jung EM, Senftleben D, Kothe E (2012) Transcriptome and functional analysis of mating in the basidiomycete Schizophyllum commune. Eukaryot Cell 11(5), 571-589.
Fazius F, Shelest E, Gebhardt P, Brock M (2012) The fungal α-aminoadipate pathway for lysine biosynthesis requires two enzymes of the aconitase family for the isomerization of homocitrate to homoisocitrate. Mol Microbiol 86(6), 1508-1530.
Fuellen G, Dengjel J, Hoeflich A, Hoeijemakers J, Kestler HA, Kowald A, Priebe S, Rebholz-Schuhmann D, Schmeck B, Schmitz U, Stolzing A, Sühnel J, Wuttke D, Vera J (2012) Systems biology and bioinformatics in aging research: a workshop report. Rejuvenation Res 15(6), 631-641.
Gerke J, Bayram O, Feussner K, Landesfeind M, Shelest E, Feussner I, Braus GH (2012) Breaking the silence: protein stabilization uncovers silenced biosynthetic gene clusters in the fungus Aspergillus nidulans. Appl Environ Microbiol 78(23), 8234-8244.
Guthke R, Linde J, Mech F, Figge MT (2012) Systems biology of microbial infection. Front Microbiol 3, 328.
Hecker M, Goertsches RH, Fatum C, Koczan D, Thiesen HJ, Guthke R, Zettl UK (2012) Network analysis of transcriptional regulation in response to intramuscular interferon-β-1a multiple sclerosis treatment. Pharmacogenomics J 12(4), 360.