Gianni Panagiotou

Prof. Dr. Gianni Panagiotou

Microbiome Dynamics · Head +49 3641 532-1759 gianni.panagiotou@leibniz-hki.de

Curriculum vitae

Main Research Areas
  • Medical & Environmental Metagenomics: human, mice, marine, plants;
  • Systems Biology: -omics integration, chemical-protein & protein-protein interaction networks; 
  • Synthetic Biology: genome-scale metabolic modelling, design of probiotics, discovery of postbiotics

Publications

Seelbinder B, Wallstabe J, Marischen L, Weiss E, Wurster S, Page L, Loffler C, Bussemer L, Schmitt AN, Wolf T, Linde J, Cicin-Sain L, Becker J, Kalinke U, Vogel J, Panagiotou G, Einsele H, Westermann AJ, Schauble S, Loeffler J (2020) Triple RNA-seq reveals synergy in a human virus-fungus co-infection model. Cell Reports 33(7), 108389.
Chen J*, McIlroy SE, Archana A, Baker DM, Panagiotou G** (2019) A pollution gradient contributes to the taxonomic, functional, and resistome diversity of microbial communities in marine sediments. Microbiome 7(1), 104.
Kang K, Bergdahl B, Machado D, Dato L, Han TL, Li J, Villas-Boas S, Herrgård MJ, Förster J, Panagiotou G (2019) Linking genetic, metabolic and phenotypic diversity among S. cerevisiae strains using multi-omics associations Gigascience 8(4), giz015.
Li J, Rettedal EA, van der Helm E, Ellabaan M, Panagiotou G**, Sommer MOA**(corresponding authors**) (2019) Antibiotic treatment drives the diversification of the human gut resistome. Genom Proteom Bioinf 17(1), 39-51.
Zhang L, Ouyang Y, Li H, Shen L, Ni Y, Fang Q, Wu G, Qian L, Xiao Y, Zhang J, Yin P, Panagiotou G, Xu G, Ye J, Jia W (2019) Metabolic phenotypes and the gut microbiota in response to dietary resistant starch type 2 in normal-weight subjects: a randomized crossover trial. Sci Rep 9(1), 4736.
Zheng T, Li J, Ni Y, Kang K, Misiakou MA, Imamovic L, Chow BKC, Rode AA, Bytzer P, Sommer M, Panagiotou G** (2019) Mining, analyzing, and integrating viral signals from metagenomic data. Microbiome 7(1), 42.
Gill H, Ip HW, Yim R, Tang WF, Pang HH, Lee P, Leung GMK, Li J, Tang K, So JCC, Leung RYY, Li J, Panagioutou G, Lam CCK, Kwong YL (2018) Next-generation sequencing with a 54-gene panel identified unique mutational profile and prognostic markers in Chinese patients with myelofibrosis. Ann Hematol 98(4), 869-879.
Imamovic L, Misiakou MA, van der Helm E, Panagiotou G, Muniesa M, Sommer MOA (2018) Complete genome sequence of Escherichia coli strain WG5. Genome Announc 6(2), e01403-17.
Kang K, Ni Y, Li J, Imamovic L, Sarkar C, Kobler MD, Heshiki Y, Zheng T, Kumari S, Wong JCY, Archna A, Wong CWM, Dingle C, Denizen S, Baker DM, Sommer MOA, Webster CJ, Panagiotou G** (2018) The environmental exposures and inner- and intercity traffic flows of the metro system may contribute to the human skin microbiome and resistome. Cell Reports 24(5), 1190-1202.
Lau SKP, Teng JLL, Chiu TH, Chan E, Tsang AKL, Panagiotou G, Zhai SL, Woo PCY (2018) Differential microbial communities of omnivorous and herbivorous cattle in Southern China. Comput Struct Biotechnol J 16, 54-60.

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