(2023)
Evaluation of reproducible cryogel preparation based on automated image analysis using deep learning.
J Biomed Mater Res A ,
1-16.

Dr. Zoltán Cseresnyés
Applied Systems Biology · PolyTarget +49 3641 532-1532 zoltan.cseresnyes@leibniz-hki.deCurriculum vitae
Main Research Areas
- Intravital 2-photon microscopy of the immune system
- Software development for automated and advanced image analysis and model-based simulations
- Image-based Systems Biology
Professional Career
since 2016 | Research associate, imaging and image analysis specialist at the Hans Knoell Institute, Jena |
2016-2016 | Microscopy and imaging specialist at the Deutsches Rheuma-Forschungszentrum (DRFZ) and the Beuth Hochschule, Berlin |
2012-2016 | Microscopy and imaging specialist in the JIMI (Joint Intravital Microscopy and Imaging) project at the Deutsches Rheuma-Forschungszentrum, Max Delbrück Center (Berlin) and at the Hans Knoell Institute, Jena |
2010-2012 | Research associate and Co-manager of the Confocal and 2-Photon Microscopy Core Facility at Max Delbrück Center for Molecular Medicine in Berlin |
2007-2010 | Imaging Facility manager in the Department of Zoology at the University of Cambridge (GB) |
1994-2007 | Research associate and confocal imaging specialist in the Department of Biochemistry and Molecular Biology at the University of Maryland Baltimore (USA) |
1991-1994 | Research associate in the Department of Physiology at the School of Medicine at Debrecen University (HU) |
1985-1991 | Research associate in the Department of Solid State Physics at Debrecen University (HU) |
Publications
(2023)
Tuning the corona-core ratio of polyplex micelles for selective oligonucleotide delivery to hepatocytes or hepatic immune cells.
Biomaterials 294,
122016.
(2023)
JIPipe: Visual batch processing for ImageJ.
Nat Methods 20(2),
168-169.
(2023)
The lipid raft-associated protein stomatin is required for accumulation of dectin-1 in the phagosomal membrane and for full activity of macrophages against Aspergillus fumigatus.
mSphere 8(8),
e0052322.
(2023)
Targeting of phagolysosomes containing conidia of the human pathogenic fungus Aspergillus fumigatus with polymeric particles.
Appl Microbiol Biotechnol 107(2-3),
819-834.
(2023)
Aspergillus fumigatus hijacks human p11 to redirect fungal-containing phagosomes to non-degradative pathway.
Cell Host Microbe 31(3),
373-388.
(2023)
Analysis of HDACi-coupled Nanoparticles: Opportunities and challenges.
In: Humana, New York, NY (eds.) HDAC/HAT Function Assessment and Inhibitor Development. Methods in Molecular Biology 2589, pp. 129-144. Springer Protocols.
ISBN: 978-1-0716-2787.
(2023)
Guided-deconvolution for correlative light and electron microscopy.
PLOS One 18(3),
e0282803.
(2023)
Polymer-based particles against pathogenic fungi: A non-uptake delivery of compounds.
Biomater Adv 146,
213300.
(2022)
Invasive aspergillosis-on-chip: A quantitative treatment study of human Aspergillus fumigatus infection.
Biomaterials 283,
121420.