(2014)
Comments on the distribution and phylogeny of type I polyketide synthases and nonribosomal peptide synthetases in eukaryotes.
Proc Natl Acad Sci U S A 111,
E3946.
Dr. Ekaterina Shelest
AlumniPublications
(2014)
Gene expansion shapes genome architecture in the human pathogen Lichtheimia corymbifera: an evolutionary genomics analysis in the ancient terrestrial Mucorales (Mucoromycotina).
PLOS Genetics 10(8),
e1004496.
(2014)
Genomics to study basal lineage fungal biology: phylogenomics suggest a common origin
In: Alistair J.B. Brown (ed.) The Mycota XIII, Fungal Genomics 2. edition. 13, pp. 31-60. Springer, Berlin, Heidelberg.
(2014)
Terrein Biosynthesis in Aspergillus terreus and Its Impact on Phytotoxicity.
Chem Biol 21(6),
719-731.
(2013)
Motif-based method for genome-wide prediction of eukaryotic gene clusters
In: A. Petrosino, L. Maddalena, P. Pala (eds.) Lecture Notes in Computer Science (LNCS)
2nd International Workshop on Pattern Recognition in Proteomics, Structural Biology and Bioinformatics, Naples, Italien, 09/09/2013-09/10/2013, 8158, pp. 389-398.Springer-Verlag, Berlin, Heidelberg.
(2012)
Novel traits of Trichoderma predicted through the analysis of its secretome.
FEMS Microbiol Lett 337(1),
1-9.
(2012)
Breaking the silence: protein stabilization uncovers silenced biosynthetic gene clusters in the fungus Aspergillus nidulans.
Appl Environ Microbiol 78(23),
8234-8244.
(2012)
Comparative genome analysis of Trichophyton rubrum and related dermatophytes reveals candidate genes involved in infection.
MBio 3(5),
e00259.
(2010)
Activation of a silent fungal polyketide biosynthesis pathway through regulatory cross talk with a cryptic nonribosomal peptide synthetase gene cluster.
Appl Environ Microbiol 76(24),
8143-8149.
(2010)
DistanceScan: a tool for promoter modeling.
Bioinformatics 26(11),
1460-1462.